Table of Contents

Everything

Modules

fastSBMLCreator
fastSBMLCreator.fastSBMLCreator
libModelSimilarity
libModelSimilarity.bicluster
libModelSimilarity.bicluster.bicluster
libModelSimilarity.bicluster.interpret_bicluster
libModelSimilarity.bicluster.interpret_nnmf
libModelSimilarity.calc_bimatrix
libModelSimilarity.cluster
libModelSimilarity.compareModels
libModelSimilarity.eTVSM
libModelSimilarity.fake_annotations
libModelSimilarity.hand_curated_clusters
libModelSimilarity.html
libModelSimilarity.okapicluster
libModelSimilarity.qualifiers
libModelSimilarity.similarity_query
libModelSimilarity.stats
libModelSimilarity.wolfscluster
libPyless
libPyless.pyless
libPyless.pyless2
libPyless.pylessDerivVar
libPyless.pylessOdeCompare
libPyless.pylessPyscesStoich
libSBAnnotation
libSBAnnotation.annotate
libSBAnnotation.buildDB
libSBAnnotation.config
libSBAnnotation.database
libSBAnnotation.database_new
libSBAnnotation.file
libSBAnnotation.indexedTables
libSBAnnotation.mydifflib
libSBAnnotation.sbannotationSOAPserver
libSBAnnotation.sbannotationSOAPserver2
libSBAnnotation.sbo
libSBAnnotation.stderr
libSBAnnotation.tables
libSBAnnotation.xmlobject
libSBtab
libSBtab.Column
libSBtab.Document
libSBtab.Exception
libSBtab.GenerateSBtab
libSBtab.Helper
libSBtab.IDMerge
libSBtab.Parser
libSBtab.Row
libSBtab.Table
libSBtab.Validator
libSBtab.Value
libSBtab.Warning
libSBtab.convert
libTI2
libTI2.aa
libTI2.add_new_kinetics
libTI2.add_sboterms_to_sbml
libTI2.global_options
libTI2.laotide
libTI2.model
libTI2.model.additional_information_handler
libTI2.model.flat_formula_database_parser
libTI2.model.function_manipulation
libTI2.model.model
libTI2.model.pre_defined_formulas
libTI2.model.rre_generator
libTI2.model.sboreader
libTI2.optimize
libTI2.optimize.nnca
libTI2.results
libTI2.results.consolewriter
libTI2.results.simulation_data_handler
libTI2.solvers
libTI2.solvers.abstract_fortran_solver
libTI2.solvers.bestfortransolver
libTI2.solvers.copasisolver
libTI2.solvers.csolver
libTI2.solvers.dopri5solver
libTI2.solvers.eulsimsolver
libTI2.solvers.limexsolver
libTI2.solvers.lsodasolver
libTI2.solvers.lsodesolver
libTI2.solvers.radausolver
libTI2.solvers.seulexsolver
libTI2.solvers.solver
semanticSBML
semanticSBML.Model
semanticSBML.annotate
semanticSBML.balance
semanticSBML.kegg2sbml
semanticSBML.kineticizer
semanticSBML.merge
semanticSBML.merge_datamodel
semanticSBML.merge_logic
semanticSBML.sbml2dot
semanticSBML.sbmlcheck
semanticSBML.sbmlmisc
semanticSBML.sbo
semanticSBML.xmlobject
semanticSBMLgui
semanticSBMLgui.gui_main_ui
semanticSBMLgui.gui_resources
semanticSBMLgui.gui_view_annotate
semanticSBMLgui.gui_view_balance
semanticSBMLgui.gui_view_build
semanticSBMLgui.gui_view_check
semanticSBMLgui.gui_view_graph
semanticSBMLgui.gui_view_merge
semanticSBMLgui.gui_view_semanticSBML
semanticSBMLgui.gui_views
semanticSBMLgui.semanticSBML_gui_resource_rc
semanticSBMLui
semanticSBMLui.CustomInteractiveConsole
semanticSBMLui.console_views
semanticSBMLui.docmanager
semanticSBMLui.ui_resources