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| __init__(self,
filename=None,
stepnumber=1000,
stepsize=0.01) |
source code
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add_aim(self,
aim,
sbmlid2copasiid=None)
Note that in the aim the reaction ids have to be replaced by copasi
ids or the sbmlid2copasiid dictionary has to be given. |
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| add_species(self,
name,
initial_concentration) |
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| add_reaction(self,
substrate2stoich,
product2stoich,
modifier2stoich,
kinetics,
reversible=True) |
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| add_parameter_estimation(self,
outfilename,
parameterfile,
inhibitor_name,
aim,
sbmlid2copasiid,
algorithm,
guessed_value=0.0) |
source code
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